Projects

Functional Representation of Gene Signatures Embeddings Generator

A streamlit app to codelessly generate gene signature embeddings based on FRoGS (Nat. Commun. 2024).

ARDSMAICR

The ARDSMAICR package contains the results of a meta-analysis by information content (MAIC) of genome-wide studies of the host response to acute respiratory distress syndrome (ARDS). These data are accompanied by a range of helper functions useful for analysis.

Pubmed Command Line Interface

A Python cli that allows you to search PubMed for publications based on a specific query term.