Functional Representation of Gene Signatures Embeddings Generator

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This tool helps you create embeddings for gene signatures using GO and ARCHS4 data.

FroGS is described in the original publication by Chen, H., King, F.J., Zhou, B. et al. Drug target prediction through deep learning functional representation of gene signatures. Nature Commun. 15, 1853 (2024). https://doi.org/10.1038/s41467-024-46089-y.

The app is hosted at https://frogsembeddings.streamlit.app.

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ARDSMAICR

The ARDSMAICR package contains the results of a meta-analysis by information content (MAIC) of genome-wide studies of the host response to acute respiratory distress syndrome (ARDS). These data are accompanied by a range of helper functions useful for analysis.